This project investigated the signal thresholding effectiveness at reducing the instrument noise of an electron multiplying charged coupled device (EMCCD) based micro-CT system at low x-ray exposure levels. Scans of a mouse spine and an iodine phantom were taken using an EMCCD detector coupled with a micro-CT system. An iodine filter of 4 mg/cm2 area density was placed in the beam. The output signal was thresholded using some multiple of the inherent background noise. For each threshold, 100, 200, and 300 frames were summed for each projection to evaluate the effect on the reconstructed image. The projection images from the scans were compared using line profiles and their SNR. Our results indicate that, as the threshold was increased, the line profiles of the projection images showed less statistical variation, but also lower signal levels, so that the SNR of the projection images decreased as the threshold increased. When the line profile of a projection image obtained using a signal threshold is compared with one obtained using energy integrating mode, the profile obtained using thresholding had less variation than that obtained using energy integration, which indicates less instrument noise. The SNR at the edges of the scan object is higher in the thresholded images when compared with the energy integrated projection images. We conclude that thresholding the output signal from an EMCCD detector at low x-ray exposure levels is an effective method to reduce the instrument noise of an EMCCD detector.
A small animal micro-CT system was built using an EMCCD detectors having complex pre-digitization amplification technology, high-resolution, high-sensitivity and low-noise. Noise in CBCT reconstructed images when using predigitization amplification behaves differently than commonly used detectors and warrants a detailed investigation. In this study, noise power and contrast sensitivity were estimated for the newly built system. Noise analysis was performed by scanning a water phantom. Tube voltage was lowered to minimum delivered by the tube (20 kVp and 0.5 mA) and detector gain was varied. Contrast sensitivity was analyzed by using a phantom containing different iodine contrast solutions (20% to 70%) filled in six different tubes. First, we scanned the phantom using various x-ray exposures at 40 kVp while changing the gain to maintain the background air value of the projection images constant. Next, the exposure was varied while the detector gain was maintained constant. Radial NPS plots show that noise power level increases as gain increases. Contrast sensitivity was analyzed by calculating ratio of signal-to-noise ratios (SNR) for increased gain with those of low constant gain at each exposure. The SNR value at low constant gain was always lower than SNR of high detector gain at all x-ray settings and iodine contrast. The largest increase of SNR approached 1.3 for low contrast feature for an iodine concentration of 20%. Despite an increase in noise level as gain increases, the SNR improvement shows that signal level also increases because of the unique on-chip gain of the detector.
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